CDS

Accession Number TCMCG007C35396
gbkey CDS
Protein Id XP_009147862.1
Location complement(join(2154906..2154930,2155100..2155213,2155303..2155849,2155949..2156060,2156142..2156233,2156430..2156558,2156642..2156762,2157046..2157141,2157247..2157336,2157452..2157552,2157649..2157772,2157846..2158019,2158096..2158268,2158446..2158530))
Gene LOC103871374
GeneID 103871374
Organism Brassica rapa

Protein

Length 660aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009149614.3
Definition DNA polymerase kappa isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category L
Description dna polymerase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03511        [VIEW IN KEGG]
EC 2.7.7.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03460        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
ko05210        [VIEW IN KEGG]
ko05212        [VIEW IN KEGG]
ko05213        [VIEW IN KEGG]
ko05214        [VIEW IN KEGG]
ko05216        [VIEW IN KEGG]
ko05217        [VIEW IN KEGG]
ko05218        [VIEW IN KEGG]
ko05220        [VIEW IN KEGG]
ko05222        [VIEW IN KEGG]
ko05223        [VIEW IN KEGG]
ko05224        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
ko05226        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
map05210        [VIEW IN KEGG]
map05212        [VIEW IN KEGG]
map05213        [VIEW IN KEGG]
map05214        [VIEW IN KEGG]
map05216        [VIEW IN KEGG]
map05217        [VIEW IN KEGG]
map05218        [VIEW IN KEGG]
map05220        [VIEW IN KEGG]
map05222        [VIEW IN KEGG]
map05223        [VIEW IN KEGG]
map05224        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
map05226        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000731        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003887        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006301        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019985        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034061        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042276        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGACGAAGGCGAATCATCGAGCAATAGTCCGTCGCGTCCATGGGAATCATACAACACCGTCTTCACCAACGCCAAAGCCGGAATGGAGGGAGTTGACAAGGAGAAAGTGCAGAGGATTGTGTATGAGATGAGTAAAGGATCCAAGTACTTCCAAAACGAGGAGCGTAAAGAAGCTCTTATGAAGCAGAAGATTGAGCATATGCGTGATAGGTGTGCTAAGCTCTCTTCCTCTGATCTATCTAACTACCAGAAGGTTGTTGATAGAAGGATCTTAGAGCTTGAAGCTACGCGGGATCTATCTAGAGTATGGCTGCATGTTGATATGGATGCCTTTTATGCTGCTGTTGAGACTTTGAGCAATCCTTCGCTTAAGGGGAAACCCATGGCTGTTGGAGGCTTGTCCATGATCTCCACAGCTAATTATGAGGCAAGGAAGTTTGGAGTTCGTGCAGCTATGCCGGGCTTCATTGCTCGTAAACTGTGTCCAGATTTAATATTTGTTCCTGTGGATTTCTCCAAGTATACTCACTACAGTGATTTGACAAGAAAAGTTTTTAGGAACTATGATCCTAACTTTATCGCTGGGAGCTTGGATGAAGCCTACCTTGACATAACTGAGGTTTGTCGAGAAAGAGGTCTCTCAGGTGGAGAAATTGCAGAGGAGCTTAGATCTTCTGTTCATTCCGAGACTGGAGGACTGACATGCAGTGCGGGAGTAGCGGCTAACCGATTGCTTGCCAAGGTTTGCTCAGACATAAACAAGCCTAATGGACAGTTTGTTTTACAGAATGATCGATCAACTGTCATGACATTCATCTCTTTACTTCCTATAAGAAAGATTGGAGGAATCGGTAAAGTTACCGAGCATATTCTGAAGGATGCTTTAGAAATTAAAACATGTGGGGACATGGTGCTGAAGGGATCTCTTCTCTACGCTCTCTTTACTCAGTCTTCAGCAGACTTTTTCCTCTCTGTTGGGCTGGGGCTTGGGAAAACAGACACTCCTGAGGTTAGGTCTCGTAAAAGTATTAGCAGTGAAAGGACGTTTGCTGCGACAGGAGATGAAAGATTGCTATACTCAAAGTTAGCTGAAATTGCAGAAATGCTATCTGATGACATGAAAAAGGAGGGTCTGATGGCAAGAACACTGACACTTAAACTGAAAACTGCGACCTTCGAGATTAGGAGCAGAGCTGTTAGCCTGCAGAGGTACACATGTTCAAGCGAGGATATTCTAAAGCATGCTACAAAGCTGTTGAAGGCGGAACTTCCTGTTTCCATAAGGCTGATAGGGTTGCGAATGTCTCAATTCAATGAAGAAGCCCGCCATTCTGATCCTTCACAGGGAACTATTACCAAGTTCATCGTTCAAAAGGGTTCCTCAAGGCAAAATCTGGATGATAATGACTCATTTGACTTAGATGCTAGTAAAAATTGTTTAGGCAACGATGAGATGTTGAGTTTATCCTATGCTTCTCATGAGACAAGCTATGATCAACTGAAAGATGTTGTCGAATATGAAGAACAATCAGTAACTCCAAATCAAGAATGTAAGAAAAAGGAAGATAGGACACAAGTATTGGAAGGAGATGCTCTGCTCAGGAAACACAAGGATTGCAAAGCAGATTCAAATGCAGAAAAGACCGAAGCAGTTTCAGTATTTCCGCAGATGGAGCCGTTAGTATGGGTTGATGGGTACAGATGCAACTTGTGTGGGATCGAGCTACCTCCATCTTTTGTTGAGGAACGGCAAGAACATTCTGATTTCCATCTCGCCCAGAGACTTCAAAACGAAGAGTCTGGCCCTAGTTCTTCCACAACACCTACTTCAAAACGAAGGATTCTCGGAAAGGAAAAGGCAAATTCCAAGCCAAAGAAGCAGAAACCAAATCAAAAGGATGGTAGCAAACACATTCCAATACACACATTCTTCACAAAGAGCAATCAAAACTCGAACGACGAAACCCAGAAGAAATGA
Protein:  
MDDEGESSSNSPSRPWESYNTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFQNEERKEALMKQKIEHMRDRCAKLSSSDLSNYQKVVDRRILELEATRDLSRVWLHVDMDAFYAAVETLSNPSLKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFSKYTHYSDLTRKVFRNYDPNFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVHSETGGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFISLLPIRKIGGIGKVTEHILKDALEIKTCGDMVLKGSLLYALFTQSSADFFLSVGLGLGKTDTPEVRSRKSISSERTFAATGDERLLYSKLAEIAEMLSDDMKKEGLMARTLTLKLKTATFEIRSRAVSLQRYTCSSEDILKHATKLLKAELPVSIRLIGLRMSQFNEEARHSDPSQGTITKFIVQKGSSRQNLDDNDSFDLDASKNCLGNDEMLSLSYASHETSYDQLKDVVEYEEQSVTPNQECKKKEDRTQVLEGDALLRKHKDCKADSNAEKTEAVSVFPQMEPLVWVDGYRCNLCGIELPPSFVEERQEHSDFHLAQRLQNEESGPSSSTTPTSKRRILGKEKANSKPKKQKPNQKDGSKHIPIHTFFTKSNQNSNDETQKK